4P6Z

Crystal structure of the human BST2 cytoplasmic domain and the HIV-1 Vpu cytoplasmic domain bound to the clathrin adaptor protein complex 1 (AP1) core


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 4P6Z

Classification: PROTEIN TRANSPORT

Total Structure Weight: 216053.86

Macromolecule Entities
Molecule Chains Length Organism Details
AP-1 complex subunit gamma-1 G 627 Mus musculus Fragment: BST2/tetheirn cytoplasmic domain, UNP residues 1-613
Gene Name(s): Ap1g1 Adtg Clapg1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-1 complex subunit sigma-1A S 158 Homo sapiens Fragment: HIV-1 Vpu cytoplasmic domain
Mutation: Q11R
Gene Name(s): AP1S1 Gene View AP19 CLAPS1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-1 complex subunit mu-1 M 423 Mus musculus Fragment: Clathrin adaptor protein complex 1 (AP1) core, UNP residues 1-421
Gene Name(s): Ap1m1 Cltnm
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-1 complex subunit beta-1 B 600 Homo sapiens Fragment: UNP residues 1-584
Mutation: T431A, E476K
Gene Name(s): AP1B1 Gene View ADTB1 BAM22 CLAPB2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein Vpu V 63 Human immunodeficiency virus 1 Fragment: UNP residues 21-81
Gene Name(s): vpu
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Bone marrow stromal antigen 2 T 25 Homo sapiens Fragment: UNP residues 1-21
Gene Name(s): BST2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.186
  • Space Group: P 43

Unit Cell:

Length (Å) Angle (°)
a = 160.54 α = 90.00
b = 160.54 β = 90.00
c = 118.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-03-25
  • Released Date: 2014-05-21
  • Deposition author(s): Jia, X., Xiong, Y.

Revision History

  • Version 1_0: 2014-05-21

    Type: Initial release

  • Version 1_1: 2014-06-11

    Type: Database references

  • Version 1_2: 2017-09-13

    Type: Author supporting evidence, Derived calculations, Other, Refinement description, Source and taxonomy