4P1J
Crystal structure of wild type Hypocrea jecorina Cel7a in a hexagonal crystal form
- PDB DOI: https://doi.org/10.2210/pdb4P1J/pdb
- Classification: HYDROLASE
- Organism(s): Trichoderma reesei
- Mutation(s): No 
- Deposited: 2014-02-26 Released: 2015-03-25 
- Funding Organization(s): National Science Foundation (NSF, United States)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.62 Å
- R-Value Free: 0.213 
- R-Value Work: 0.170 
- R-Value Observed: 0.172 
This is version 3.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Exoglucanase 1 | 434 | Trichoderma reesei | Mutation(s): 0  EC: 3.2.1.91 | ||
UniProt | |||||
Find proteins for P62694 (Hypocrea jecorina) Explore P62694  Go to UniProtKB:  P62694 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62694 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | C [auth A], D [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
SM Query on SM | E [auth A], F [auth A], G [auth A], H [auth A], I [auth A] | SAMARIUM (III) ION Sm DOSGOCSVHPUUIA-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
PCA Query on PCA | A | L-PEPTIDE LINKING | C5 H7 N O3 | GLN |
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900005 Query on PRD_900005 | B | beta-cellobiose | Oligosaccharide / Metabolism |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.62 Å
- R-Value Free: 0.213 
- R-Value Work: 0.170 
- R-Value Observed: 0.172 
- Space Group: P 63 2 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 155.505 | α = 90 |
b = 155.505 | β = 90 |
c = 137.958 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-03-25  Deposition Author(s): Bodenheimer, A.B., Cuneo, M.J., Swartz, P.D., Myles, D.A., Meilleur, F.
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | 1069091 |
Revision History (Full details and data files)
- Version 1.0: 2015-03-25
Type: Initial release - Version 1.1: 2017-09-06
Changes: Author supporting evidence, Derived calculations, Source and taxonomy - Version 2.0: 2019-11-27
Changes: Author supporting evidence, Data collection, Polymer sequence - Version 2.1: 2019-12-25
Changes: Database references - Version 3.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Experimental preparation, Structure summary - Version 3.1: 2023-12-27
Changes: Data collection, Database references, Derived calculations, Structure summary