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Complete human RNase L in complex with 2-5A (5'-ppp heptamer), AMPPCP and RNA substrate.
DOI:10.2210/pdb4oav/pdb   NDB ID: NA2946
4OAV
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 163467.40
    Molecule: PROTEIN (RNase L)
    Polymer: 1 Type: protein Length: 699
    Chains: B, D
    EC#: 3.1.26   
    Organism: Homo sapiens
    Gene Names: Gene View for RNASEL RNS4
    UniProtKB: Protein Feature View | Search PDB | Q05823  
    Molecule: RNA (5'-R(P*(PO4)P*(PO4)P*AP*AP*AP*AP*(PO4))-2')
    Polymer: 2 Type: rna Length: 7
    Chains: A, C
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4OAU   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ACP
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    ACP C11 H18 N5 O12 P3
    PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
    MG
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    MG Mg
    MAGNESIUM ION
    PUP
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    PUP C14 H22 N2 O15 P2
    (2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin- 1(2H)-yl)-4-hydroxy-2-({[(S)-hydroxy{[(2R,3S,4S)- 4-hydroxy-2-(hydroxymethyl)tetrahydrofuran- 3-yl]oxy}phosphoryl]oxy}methyl)tetrahydrofuran- 3-yl dihydrogen phosphate
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    PO4
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    PO4 O4 P nonPolymer
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2946
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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