4M1G

Structure of murine IgG2a A27D7-Fab in complex with vaccinia antigen A33R at the resolution of 1.6 Angstroms


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 4M1G

Classification: IMMUNE SYSTEM

Total Structure Weight: 69059.25

Macromolecule Entities
Molecule Chains Length Organism Details
Murine IgG2a A27D7 Light chain Fab domain L 215 Mus musculus
Murine IgG2a A27D7 Heavy chain Fab domain H 220 Mus musculus
A33R A, B 97 Vaccinia virus Fragment: ectodomain (UNP residues 89-185)
Mutation: S89M, L118M, K123A, L140M
Gene Name(s): A33R VAC_DPP10_167 VAC_DPP11_167 VAC_DPP12_167 VAC_DPP13_167 VAC_DPP15_167 VAC_DPP16_167 VAC_DPP17_167 VAC_DPP19_167 VAC_DPP20_167 VAC_DPP21_167 VAC_DPP25_167 VAC_DPP9_167 VAC_TKT3_147 VAC_TKT4_147 VACAC2_167 VACCL3_167 VACV-DUKE-164 VACV_152 VACV_TT10_200 VACV_TT8_200
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.201
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 95.02 α = 90.00
b = 95.02 β = 90.00
c = 127.33 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-02
  • Released Date: 2014-08-06
  • Deposition author(s): Matho, M.H., Schlossman, A.M., Zajonc, D.M.

Revision History

  • 2015-09-23
    Type: Database references