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Crystal structure of PKZ Zalpha in complex with ds(CG)6 (tetragonal form)
DOI:10.2210/pdb4lb6/pdb   NDB ID: NA2567
4LB6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/dna
    Structure Weight: 12420.25
    Molecule: Protein kinase containing Z-DNA binding domains
    Polymer: 1 Type: protein Length: 72
    Chains: B
    EC#: 2.7.11.1   
    Fragment: Zalpha domain, UNP residues 5-70
    Organism: Danio rerio
    Gene Name: pkz
    UniProtKB: Protein Feature View | Search PDB | Q5NE14  
    Molecule: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3'
    Polymer: 2 Type: dna Length: 13
    Chains: C
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Danio rerio   Taxonomy   Common Name: Leopard danio,zebra danio,zebra fish Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
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    Identifier Details
    4LB5   
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2567
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   De Rosa, M.,  Zacarias, S.,  Athanasiadis, A.

    Deposition:   2013-06-20
    Release:   2013-09-18
    Last Modified (REVDAT):   2013-12-04
     
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    2013-12-04
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.80
    R-Value: 0.184 (obs.)
    R-Free: 0.212
    Space Group: I 4 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 110.91 α = 90.00 
    b = 110.91 β = 90.00 
    c = 43.14 γ = 90.00