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Crystal structure of PKZ Zalpha in complex with ds(CG)6 (hexagonal form)
DOI:10.2210/pdb4lb5/pdb   NDB ID: NA2566
4LB5
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/dna
    Structure Weight: 21048.05
    Molecule: Protein kinase containing Z-DNA binding domains
    Polymer: 1 Type: protein Length: 72
    Chains: A, B
    EC#: 2.7.11.1   
    Fragment: Zalpha domain, UNP residues 5-70
    Organism Danio rerio
    Gene Name pkz
    UniProtKB:   Protein Feature View | Search PDB | Q5NE14  
    Molecule: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3'
    Polymer: 2 Type: dna Length: 13
    Chains: C
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Danio rerio   Taxonomy   Common Name: Leopard danio,zebra danio,zebra fish Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4LB6   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ACT
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    ACT C2 H3 O2
    ACETATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2566
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   De Rosa, M.,  Zacarias, S.,  Athanasiadis, A.

    Deposition:   2013-06-20
    Release:   2013-09-18
    Last Modified (REVDAT):   2013-12-04
     
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    2013-12-04
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.191 (obs.)
    R-Free: 0.224
    Space Group: P 61 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 56.86 α = 90.00 
    b = 56.86 β = 90.00 
    c = 218.77 γ = 120.00