4K94

Crystal structure of KIT D4D5 fragment in complex with anti-Kit antibody Fab19


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 4K94

Classification: IMMUNE SYSTEM

Total Structure Weight: 72265.45

Macromolecule Entities
Molecule Chains Length Organism Details
Fab19 heavy chain L 226 Homo sapiens
Fab19 light chain H 220 Homo sapiens
Mast/stem cell growth factor receptor Kit C 214 Homo sapiens EC#: 2.7.10.1 IUBMB
Gene Name(s): KIT Gene View SCFR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

C N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 169.58 α = 90.00
b = 48.98 β = 122.38
c = 106.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-19
  • Released Date: 2013-10-16
  • Deposition author(s): Resheynyak, A.V., Boggon, T.J., Lax, I., Schlessinger, J.

Revision History

  • Version 1_0: 2013-10-16

    Type: Initial release

  • Version 1_1: 2014-03-12

    Type: Database references

  • Version 1_2: 2014-04-09

    Type: Source and taxonomy