4I8D

Crystal Structure of Beta-D-glucoside glucohydrolase from Trichoderma reesei


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 4I8D

Classification: HYDROLASE

Total Structure Weight: 155374.63

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-D-glucoside glucohydrolase A, B 714 Trichoderma reesei EC#: 3.2.1.21 IUBMB
Gene Name(s): bgl1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BGC
Query on BGC

A, B BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

A, B ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

A, B BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.201
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 130.41 α = 90.00
b = 107.86 β = 115.59
c = 125.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-03
  • Released Date: 2012-12-19
  • Deposition author(s): Helmich, K.E., Banerjee, G., Bianchetti, C.M., Gudmundsson, M., Sandgren, M., Walton, J.D., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • 2014-10-22
    Type: Database references
  • 2014-11-26
    Type: Database references