4HOT

Crystal Structure of Full-Length Human IFIT5 with 5`-triphosphate Oligoadenine

Structural Biology Knowledgebase: 4HOT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HOT

Classification: rna binding protein / rna

Total Structure Weight: 57390.45


Macromolecule Entities
Molecule Chains Length Organism Details
Interferon-induced protein with tetratricopeptide repeats 5 A 482 Homo sapiens Gene Name(s): IFIT5 Gene View ISG58 RI58
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*(ATP)P*AP*AP*A)-3') X 4 synthetic 5`-triphosphate oligoadenine

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ATP
Query on ATP
X NON-POLYMER C10 H16 N5 O13 P3 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.180
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.63 α = 90.00
b = 85.19 β = 106.34
c = 60.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-22
  • Released Date: 2013-01-23
  • Deposition author(s): Abbas, Y.M., Pichlmair, A., Gorna, M.W., Superti-Furga, G., Nagar, B.

Revision History

  • 2013-02-27
    Type: Citation | Details: Citation update
  • 2013-02-06
    Type: Citation | Details: Citation update