4HIF

Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions

Structural Biology Knowledgebase: 4HIF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.85 Å
  • R-Value Observed: 0.092

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HIF

Classification: DNA

Total Structure Weight: 3993.03

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') A, B 6 Synthetic construct

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
SPK
Query on SPK

B SPERMINE (FULLY PROTONATED FORM)
C10 H30 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-R
Ligand Explorer
 
JSmol
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.85 Å
  • R-Value Observed: 0.092
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 17.79 α = 90.00
b = 30.91 β = 90.00
c = 44.20 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2012-10-11
  • Released Date: 2013-06-05
  • Deposition author(s): Drozdzal, P., Gilski, M., Kierzek, R., Lomozik, L., Jaskolski, M.

Revision History

No revisions since initial release