4HHL

High resolution crystal structure of Glucose Isomerase from Streptomyces sp. SK

Structural Biology Knowledgebase: 4HHL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.131

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HHL

Classification: isomerase

Total Structure Weight: 86994.95

Macromolecule Entities
Molecule Chains Length Organism Details
Xylose isomerase A, B 388 Streptomyces sp. sk EC#: 5.3.1.5 IUBMB
Gene Name(s): xylA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A, B COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.131
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 110.80 α = 90.00
b = 91.68 β = 119.65
c = 84.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-10
  • Released Date: 2013-03-27
  • Deposition author(s): Ben Hlima, H., Riguet, J., Haser, R., Aghajari, N.

Revision History

  • 2013-11-13
    Type: Citation | Details: Citation update
  • 2013-08-07
    Type: Citation | Details: Citation update
  • 2013-07-24
    Type: Citation | Details: Citation update