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DNA binding by GATA transcription factor-complex 1
DOI:10.2210/pdb4hca/pdb   NDB ID: NA2056
4HCA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 25290.74
    Molecule: Trans-acting T-cell-specific transcription factor GATA-3
    Polymer: 1 Type: protein Length: 115
    Chains: A
    Fragment: UNP residues 260 -368
    Organism Homo sapiens
    Gene Name GATA3
    UniProtKB:   Protein Feature View | Search PDB | P23771  
    Molecule: DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*CP*G)-3')
    Polymer: 2 Type: dna Length: 20
    Chains: X
    Molecule: DNA (5'-D(*TP*TP*CP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*A)-3')
    Polymer: 3 Type: dna Length: 20
    Chains: Y
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2056
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Chen, Y.,  Bates, D.L.,  Dey, R.,  Chen, L.

    Deposition:   2012-09-28
    Release:   2012-12-05
    Last Modified (REVDAT):   2013-01-02
     
  •   Revision History    Hide
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    2013-01-02
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.80
    R-Value: 0.247 (obs.)
    R-Free: 0.296
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 54.49 α = 90.00 
    b = 36.55 β = 103.70 
    c = 66.12 γ = 90.00