DNA binding by GATA transcription factor-complex 1
DOI:10.2210/pdb4hca/pdb   NDB ID: NA2056
Primary Citation
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 25290.74
    Molecule: Trans-acting T-cell-specific transcription factor GATA-3
    Polymer: 1 Type: protein Length: 115
    Chains: A
    Fragment: UNP residues 260 -368
    Organism: Homo sapiens
    Gene Name: Gene View for GATA3
    UniProtKB: Search PDB | P23771   Protein Feature View
    Molecule: DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*CP*G)-3')
    Polymer: 2 Type: dna Length: 20
    Chains: X
    Molecule: DNA (5'-D(*TP*TP*CP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*A)-3')
    Polymer: 3 Type: dna Length: 20
    Chains: Y
  •   Structure Validation Hide

  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN Zn
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2056
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
  •   MyPDB Personal Annotations Hide
  •   Deposition Summary Hide
    Authors:   Chen, Y.,  Bates, D.L.,  Dey, R.,  Chen, L.

    Deposition:   2012-09-28
    Release:   2012-12-05
    Last Modified (REVDAT):   2013-01-02
  •   Revision History    Hide
    Mouse over text for details
  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.80
    R-Value: 0.247 (obs.)
    R-Free: 0.296
    Space Group: P 1 21 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 54.49 α = 90.00 
    b = 36.55 β = 103.70 
    c = 66.12 γ = 90.00