Crystal structure of the heterotetrameric complex of GlucD and GlucDRP from E. coli K-12 MG1655 (EFI TARGET EFI-506058) DOI:10.2210/pdb4gyp/pdb

4GYP   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Lyase/lyase Structure Weight: 200789.65 Molecule: Glucarate dehydratase Polymer: 1 Type: protein Length: 446 Chains: A, B EC#: 4.2.1.40    Organism Escherichia coli K-12 Gene Names gudD ygcX b2787 JW2758 UniProtKB:   Protein Feature View | Search PDB | P0AES2     Molecule: Glucarate dehydratase-related protein Polymer: 2 Type: protein Length: 458 Chains: C, D EC#: 4.2.1    Organism Escherichia coli K-12 Gene Names gudX ygcY b2788 JW2759 UniProtKB:   Protein Feature View | Search PDB | Q46915         Source Hide Polymer: 1 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli   Polymer: 2 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1EC7  E. coli D-glucarate dehydratase native enzyme  1EC8  E. coli D-glucarate dehydratase bound to product 2,3-DIHYDROXY-5-OXO-HEXANEDIOATE  1EC9  E. coli D-glucarate dehydratase bound to xylarohydroxamate  1ECQ  E. coli D-glucarate dehydratase bound to 4-deoxyglucarate      Ligand Chemical Component Hide Identifier Formula Name Interactions CIT Search  Download  C6 H8 O7 CITRIC ACID   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer P6G Search  Download  C12 H26 O7 HEXAETHYLENE GLYCOL   Ligand Explorer PEG Search  Download  C4 H10 O3 DI(HYDROXYETHYL)ETHER   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 5 Domains - data from Pfam   GO Terms: 11 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Lukk, T.,  Ghasempur, S.,  Imker, H.J.,  Gerlt, J.A.,  Nair, S.K.,  Enzyme Function Initiative Deposition:   2012-09-05 Release:   2012-09-12 Last Modified (REVDAT):   2012-09-19     Revision History    Hide Mouse over text for details 2012-09-19 Entry authorship     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.10 R-Value: 0.150 (obs.) R-Free: 0.186 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 155.47 α = 90.00  b = 113.02 β = 105.89  c = 128.59 γ = 90.00