Crystal structure of LSD2-NPAC with H3 in space group P3221 DOI:10.2210/pdb4gus/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase Structure Weight: 104771.60 Molecule: Lysine-specific histone demethylase 1B Polymer: 1 Type: protein Length: 776 Chains: A EC#: 1    Fragment: UNP residues 51-822 Organism Homo sapiens Gene Names KDM1B AOF1 C6orf193 LSD2 UniProtKB:   Protein Feature View | Search PDB | Q8NB78     Molecule: Putative oxidoreductase GLYR1 Polymer: 2 Type: protein Length: 124 Chains: B EC#: 1    Fragment: UNP residues 152-268 Organism Homo sapiens Gene Names GLYR1 HIBDL NP60 UniProtKB:   Protein Feature View | Search PDB | Q49A26     Molecule: Histone H3.3 Polymer: 3 Type: protein Length: 21 Chains: C Fragment: UNP residues 2-22 Mutation: K4M Organism Homo sapiens Gene Names H3F3A H3.3A H3F3 PP781 H3F3B H3.3B UniProtKB:   Protein Feature View | Search PDB | P84243         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli   Polymer: 3 Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy         Related PDB Entries Hide Identifier Details 4GU1    4GUR    4GUT        Ligand Chemical Component Hide Identifier Formula Name Interactions FAD Search  Download  C27 H33 N9 O15 P2 FLAVIN-ADENINE DINUCLEOTIDE   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer IOD Search  Download  I IODIDE ION   Ligand Explorer ZN Search  Download  Zn ZINC ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 6 Domains - data from Pfam   GO Terms: 25 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Chen, F.,  Dong, Z.,  Fang, J.,  Yang, Y.,  Li, Z.,  Xu, Y.,  Yang, H.,  Wang, P.,  Fang, R.,  Shi, Y.,  Xu, Y. Deposition:   2012-08-29 Release:   2013-01-16     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.23 R-Value: 0.209 (obs.) R-Free: 0.237 Space Group: P 32 2 1 Unit Cell:   Length [Å] Angles [°] a = 101.08 α = 90.00  b = 101.08 β = 90.00  c = 177.37 γ = 120.00