4GMT

Crystal structure of heterosubtypic Fab S139/1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 4GMT

Classification: IMMUNE SYSTEM

Total Structure Weight: 97468.60

Macromolecule Entities
Molecule Chains Length Organism Details
Fab S139/1 light chain L, M 214 Mus musculus
Fab S139/1 heavy chain H, I 225 Mus musculus

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

H, I N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

H, I SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
H, I L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.158
  • Space Group: P 32 1 2

Unit Cell:

Length (Å) Angle (°)
a = 106.84 α = 90.00
b = 106.84 β = 90.00
c = 185.52 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-16
  • Released Date: 2012-10-03
  • Deposition author(s): Lee, P.S., Ekiert, D.C., Wilson, I.A.

Revision History

  • Version 1_0: 2012-10-03

    Type: Initial release

  • Version 1_1: 2012-10-17

    Type: Database references

  • Version 1_2: 2012-10-31

    Type: Database references