4GLR

Structure of the anti-ptau Fab (pT231/pS235_1) in complex with phosphoepitope pT231/pS235


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 4GLR

Classification: IMMUNE SYSTEM

Total Structure Weight: 95855.81

Macromolecule Entities
Molecule Chains Length Organism Details
phospho-peptide A, B 18 Homo sapiens Fragment: phospho-peptide
Gene Name(s): MAPT Gene View MAPTL MTBT1 TAU
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
anti-ptau heavy chain H, J 229 Gallus gallus Fragment: heavy chain
anti-ptau light chain I, K 212 Gallus gallus Fragment: light chain

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

H, K PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
TPO
Query on TPO
A, B L-PEPTIDE LINKING C4 H10 N O6 P THR
SEP
Query on SEP
A, B L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.179
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 68.50 α = 90.00
b = 216.50 β = 90.00
c = 70.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-14
  • Released Date: 2012-11-21
  • Deposition author(s): Tu, C., Mosyak, L., Bard, J.

Revision History

  • Version 1_0: 2012-11-21

    Type: Initial release

  • Version 1_1: 2013-01-02

    Type: Database references

  • Version 1_2: 2013-01-16

    Type: Database references

  • Version 1_3: 2013-10-02

    Type: Source and taxonomy