4FAV

Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 50 Days

Structural Biology Knowledgebase: 4FAV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.163

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FAV

Classification: Oxidoreductase / Electron transport

Total Structure Weight: 200191.71

Macromolecule Entities
Molecule Chains Length Organism Details
Methylamine utilization protein MauG A, B 373 Paracoccus denitrificans EC#: 1 IUBMB
Fragment: unp residues 21-387
Gene Name(s): mauG Pden_4736
Methylamine dehydrogenase light chain C, E 137 Paracoccus denitrificans EC#: 1.4.9.1 IUBMB
Fragment: unp residues 58-188
Gene Name(s): mauA
Methylamine dehydrogenase heavy chain D, F 385 Paracoccus denitrificans EC#: 1.4.9.1 IUBMB
Fragment: unp residues 33-417
Gene Name(s): Pden_4730

Small Molecules
Ligands 6 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A, B HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MES
Query on MES

D, F 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGE
Query on PGE

F TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
0AF
Query on 0AF
C, E L-PEPTIDE LINKING C11 H12 N2 O3 TRP

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.163
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.53 α = 109.94
b = 83.52 β = 91.54
c = 107.78 γ = 105.78

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-22
  • Released Date: 2013-03-06
  • Deposition author(s): Yukl, E.T., Wilmot, C.M.

Revision History

  • 2013-04-17
    Type: Citation | Details: Citation update
  • 2013-03-27
    Type: Citation | Details: Citation update