4EK5

Crystal structure of the cdk2 in complex with aminopyrazole inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.175

Literature

Macromolecules
Sequence Display for 4EK5

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 34272.81

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinase 2 A 299 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
03K
Query on 03K

A N-(5-cyclopropyl-1H-pyrazol-3-yl)benzene- 1,4-dicarboxamide
C14 H14 N4 O2
HGEJNHUGVPFHIF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.175
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.57 α = 90.00
b = 71.79 β = 90.00
c = 72.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-09
  • Released Date: 2013-05-01
  • Deposition author(s): Kang, Y.N., Stuckey, J.A.

Revision History

  • Version 1_0: 2013-05-01

    Type: Initial release

  • Version 1_1: 2013-05-08

    Type: Database references

  • Version 1_2: 2013-05-22

    Type: Other

  • Version 1_3: 2013-05-29

    Type: Other