Crystal Structure of the N-Terminal Domain of HIV-1 Capsid in Complex With Inhibitor BM4
4E92
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Structural Protein/inhibitor
    Structure Weight: 34526.50
    Molecule: Gag protein
    Polymer: 1 Type: protein Length: 146
    Chains: A, B
    Fragment: N-terminal domain, UNP residues 133-278
    Organism: Human immunodeficiency virus 1
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P12497  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Escherichia coli  
     
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    Identifier Details
    4E91    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    0OE
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    0OE C29 H23 Cl N6 O2
    4-{2-[5-(3-chlorophenyl)-1H-pyrazol-4-yl]- 1-[3-(1H-imidazol-1-yl)propyl]-1H-benzimidazol- 5-yl}benzoic acid
    0OE:4E92
    0OG
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    0OG C30 H25 N5 O5
    3-{5-[3-ethyl-5-(5-methylfuran-2-yl)-1H-pyrazol- 1-yl]-1-[(6-oxo-1,6-dihydropyridin-3-yl)methyl]- 1H-benzimidazol-2-yl}-4-hydroxybenzoic acid
    0OG:4E92
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Lemke, C.T.

    Deposition:   2012-03-20
    Release:   2012-04-25
    Last Modified (REVDAT):   2013-06-12
     
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    2013-06-12
    Citation
    2012-06-06
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.222 (obs.)
    R-Free: 0.264
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 81.71 α = 90.00 
    b = 81.71 β = 90.00 
    c = 90.15 γ = 90.00