4E6W

ClbP in complex with 3-aminophenyl boronic acid

Structural Biology Knowledgebase: 4E6W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.195

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4E6W

Classification: HYDROLASE

Total Structure Weight: 111381.57

Macromolecule Entities
Molecule Chains Length Organism Details
ClbP peptidase A, B, C 335 Escherichia coli EC#: 3.5.2.6 IUBMB
Gene Name(s): c2452

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
APB
Query on APB

A, B, C M-AMINOPHENYLBORONIC ACID
C6 H8 B N O2
JMZFEHDNIAQMNB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B, C PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.195
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.49 α = 90.00
b = 149.36 β = 124.21
c = 88.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-16
  • Released Date: 2013-03-27
  • Deposition author(s): Cougnoux, A., Delmas, J., Bonnet, R.

Revision History

No revisions since initial release