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Protelomerase tela Y201A covalently complexed with substrate DNA
DOI:10.2210/pdb4e10/pdb   NDB ID: NA1846
4E10
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: DNA Binding Protein/dna
    Structure Weight: 63014.83
    Molecule: Protelomerase
    Polymer: 1 Type: protein Length: 462
    Chains: A
    Mutation: Y201A
    Organism Agrobacterium fabrum str. C58
    Gene Names telA Atu2523
    UniProtKB:   Protein Feature View | Search PDB | Q7CWV1  
    Molecule: DNA (5'-D(*CP*AP*TP*AP*AP*(BRU)P*AP*AP*CP*AP*AP*(BRU)P*AP*T)-3')
    Polymer: 2 Type: dna Length: 13
    Chains: C
    Molecule: DNA (5'-D(*CP*AP*TP*GP*AP*TP*AP*(BRU)P*(BRU)P*GP*(BRU)P*(BRU)P*AP*(BRU)P*(BRU)P*AP*(BRU)P*G)-3')
    Polymer: 3 Type: dna Length: 18
    Chains: D
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Agrobacterium tumefaciens   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4DWP   
    4E0G   
    4E0J   
    4E0P   
    4E0Y   
    4E0Z   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    DT
    Search 
    Download      		DT C10 H15 N2 O8 P
    THYMIDINE-5'-MONOPHOSPHATE
    		DT:4E10
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    PTR
    Search      		PTR C9 H12 N O6 P TYR lPeptideLinking
    BRU
    Search      		BRU C9 H12 Br N2 O8 P DU dnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA1846
     
 
Data in orange boxes are gathered from external resources (when available).
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  •   Deposition Summary Hide
    Authors:   Shi, K.,  Aihara, H.

    Deposition:   2012-03-05
    Release:   2013-02-13
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.51
    R-Value: 0.188 (obs.)
    R-Free: 0.270
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 116.34 α = 90.00 
    b = 119.66 β = 111.30 
    c = 56.63 γ = 90.00