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Co-crystal structure of Rap1 in complex with KRIT1
4DXA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Binding
    Structure Weight: 57143.05
    Molecule: Ras-related protein Rap-1b
    Polymer: 1 Type: protein Length: 169
    Chains: A
    EC#: 3.6.5.2   
    Mutation: G12V
    Organism Homo sapiens
    Gene Names RAP1B OK/SW-cl.11
    UniProtKB:   Protein Feature View | Search PDB | P61224  
    Molecule: Krev interaction trapped protein 1
    Polymer: 2 Type: protein Length: 322
    Chains: B
    Fragment: FERM domain
    Organism Homo sapiens
    Gene Names KRIT1 CCM1
    UniProtKB:   Protein Feature View | Search PDB | O00522  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GSP
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    GSP C10 H16 N5 O13 P3 S
    5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
    GSP:4DXA
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Li, X.,  Zhang, R.,  Boggon, T.J.

    Deposition:   2012-02-27
    Release:   2012-05-16
    Last Modified (REVDAT):   2012-07-25
     
  •   Revision History    Hide
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    2012-07-25
    Citation
    2012-05-23
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.95
    R-Value: 0.198 (obs.)
    R-Free: 0.239
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 57.55 α = 90.00 
    b = 77.97 β = 90.93 
    c = 59.76 γ = 90.00