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Structural Investigation of Bacteriophage Phi6 Lysin (in complex with chitotetraose)
4DQJ
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 40046.02
    Molecule: Membrane protein Phi6 P5
    Polymer: 1 Type: protein Length: 173
    Chains: A, B
    Fragment: UNP residues 48-220
    Mutation: V207F
    Organism: Pseudomonas phage phi6
    Gene Names: p5a P5a
    UniProtKB: Protein Feature View | Search PDB | Q283U5  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Pseudomonas phage phi6   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4DQ5   
    4DQ7   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    AES
    Search 
    Download 
    AES C8 H10 F N O2 S
    4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NAG:4DQJ
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Dessau, M.A.,  Modis, Y.

    Deposition:   2012-02-16
    Release:   2013-01-02
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.23
    R-Value: 0.152 (obs.)
    R-Free: 0.170
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 43.82 α = 90.00 
    b = 50.94 β = 103.48 
    c = 65.02 γ = 90.00