4CR6

Crystal structure of the N-acetyl-D-mannosamine dehydrogenase from Flavobacterium sp. without substrates

Structural Biology Knowledgebase: 4CR6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.209

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4CR6

Classification: OXIDOREDUCTASE

Total Structure Weight: 110342.23

Macromolecule Entities
Molecule Chains Length Organism Details
N-ACYLMANNOSAMINE 1-DEHYDROGENASE A, B, C, D 271 Flavobacterium sp. 141-8 EC#: 1.1.1.233 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MAN
Query on MAN

A, C ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.209
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.26 α = 81.13
b = 59.06 β = 73.29
c = 74.21 γ = 79.25

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-02-25
  • Released Date: 2014-07-09
  • Deposition author(s): Gil-Ortiz, F., Sola-Carvajal, A., Garcia-Carmona, F., Sanchez-Ferrer, A., Rubio, V.

Revision History

  • 2014-09-03
    Type: Citation | Details: JRNL
  • 2014-09-03
    Type: Other | Details: MTRIX2, CRYST1, MTRIX3, MTRIX1