Structure of CDK9 in complex with cyclin T and a 2-amino-4-heteroaryl- pyrimidine inhibitor
4BCG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/cell Cycle
    Structure Weight: 68778.72
    Molecule: CYCLIN-DEPENDENT KINASE 9
    Polymer: 1 Type: protein Length: 331
    Chains: A
    EC#: 2.7.11.22    2.7.11.23    3.1   
    Fragment: RESIDUES 2-330
    Organism: Homo sapiens
    Gene Names: CDC2L4 TAK Gene View for CDK9
    UniProtKB: Search PDB | P50750   Protein Feature View
    Molecule: CYCLIN-T1
    Polymer: 2 Type: protein Length: 260
    Chains: B
    Fragment: RESIDUES 2-259
    Mutation: YES
    Organism: Homo sapiens
    Gene Name: Gene View for CCNT1
    UniProtKB: Search PDB | O60563   Protein Feature View
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    1PF6   IN SILICO STRUCTURE OF PROTEIN KINASE 9 
    4BCF   STRUCTURE OF CDK9 IN COMPLEX WITH CYCLIN T AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCH   STRUCTURE OF CDK9 IN COMPLEX WITH CYCLIN T AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCI   STRUCTURE OF CDK9 IN COMPLEX WITH CYCLIN T AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCJ   STRUCTURE OF CDK9 IN COMPLEX WITH CYCLIN T AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCK   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCM   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCN   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCO   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCP   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
    4BCQ   STRUCTURE OF CDK2 IN COMPLEX WITH CYCLIN A AND A 2 -AMINO-4-HETEROARYL-PYRIMIDINE INHIBITOR 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GOL
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    GOL C3 H8 O3
    GLYCEROL
    T3C
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    T3C C21 H24 N8 S
    2-[[3-(1,4-diazepan-1-yl)phenyl]amino]-4- [4-methyl-2-(methylamino)-1,3-thiazol-5-yl]pyrimidine- 5-carbonitrile
    T3C:4BCG
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    T3C
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    T3C
    N/Ain BindingDB
    N/Ain BindingMoad
    Ki: 7 nM - data from PDBbind  
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    TPO
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    TPO C4 H10 N O6 P THR lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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