4B92

Crystal structure of truncated human CRMP-5 soaked with Zn

Structural Biology Knowledgebase: 4B92 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4B92

Classification: SIGNALING PROTEIN

Total Structure Weight: 106169.72

Macromolecule Entities
Molecule Chains Length Organism Details
DIHYDROPYRIMIDINASE-RELATED PROTEIN 5 A, B 484 Homo sapiens Fragment: RESIDUES 1-483
Gene Name(s): DPYSL5 Gene View CRMP5 ULIP6

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.191
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.50 α = 90.00
b = 89.50 β = 90.00
c = 246.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-31
  • Released Date: 2013-02-13
  • Deposition author(s): Ponnusamy, R., Lohkamp, B.

Revision History

  • 2013-09-25
    Type: Biological assembly | Details: REMARK 350
  • 2013-06-19
    Type: Citation | Details: JRNL