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FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH CONSENSUS ANKYRIN REPEAT DOMAIN-LEU PEPTIDE (20-MER)
4B7E
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Oxidoreductase/peptide
    Structure Weight: 43240.95
    Molecule: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR
    Polymer: 1 Type: protein Length: 349
    Chains: A
    EC#: 1.14.11.30    1.14.11.n4   
    Organism Homo sapiens
    Gene Names HIF1AN FIH1
    UniProtKB:   Protein Feature View | Search PDB | Q9NWT6  
    Molecule: CONSENSUS ANKYRIN REPEAT DOMAIN-LEU
    Polymer: 2 Type: protein Length: 17
    Chains: B
    Details: SYNTHETIC PEPTIDE (20-MER)
    Organism synthetic construct
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1H2K  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE 
    1H2L  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE 
    1H2M  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE 
    1H2N  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE 
    1IZ3  DIMERIC STRUCTURE OF FIH (FACTOR INHIBITING HIF) 
    1MZE  HUMAN FACTOR INHIBITING HIF (FIH1) 
    1MZF  HUMAN FACTOR INHIBITING HIF (FIH1) IN COMPLEX WITH 2- OXOGLUTARATE 
    1YCI  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH N-( CARBOXYCARBONYL)-D-PHENYLALANINE 
    2CGN  FACTOR INHIBITING HIF-1 ALPHA WITH SUCCINATE 
    2CGO  FACTOR INHIBITING HIF-1 ALPHA WITH FUMARATE 
    2W0X  FACTOR INHIBITING HIF-1 ALPHA WITH PYRIDINE 2,4 DICARBOXYLIC ACID 
    2WA3  FACTOR INHIBITING HIF-1 ALPHA WITH 2-(3-HYDROXYPHENYL )-2-OXOACETIC ACID 
    2WA4  FACTOR INHIBITING HIF-1 ALPHA WITH N,3- DIHYDROXYBENZAMIDE 
    2XUM  FACTOR INHIBITING HIF (FIH) Q239H MUTANT IN COMPLEX WITH ZN(II), NOG AND ASP-SUBSTRATE PEPTIDE (20-MER) 
    2Y0I  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH TANKYRASE-2 (TNKS2) FRAGMENT PEPTIDE (21-MER) 
    2YC0  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH R-2- HYDROXYGLUTARATE 
    2YDE  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH S-2- HYDROXYGLUTARATE 
    4AI8  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH DAMINOZIDE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    GOL
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    Download      		GOL C3 H8 O3
    GLYCEROL
    OGA
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    Download      		OGA C4 H5 N O5
    N-OXALYLGLYCINE
    		OGA:4B7E
    SO4
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    Download      		SO4 O4 S
    SULFATE ION
    ZN
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    Download      		ZN Zn
    ZINC ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    OGA
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    Download      		OGA
    Ki: 1200000 nM (100) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Chowdhury, R.,  Ge, W.,  Schofield, C.J.

    Deposition:   2012-08-17
    Release:   2013-01-23
    Last Modified (REVDAT):   2013-02-20
     
  •   Revision History    Hide
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    2013-02-20
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.50
    R-Value: 0.226 (obs.)
    R-Free: 0.255
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 86.45 α = 90.00 
    b = 86.45 β = 90.00 
    c = 143.96 γ = 90.00