Crystal structure of soman-aged human butyrylcholinesterase in complex with methyl 2-(pentafluorobenzyloxyimino)pyridinium DOI:10.2210/pdb4b0p/pdb

4B0P   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 62597.65 Molecule: CHOLINESTERASE Polymer: 1 Type: protein Length: 529 Chains: A EC#: 3.1.1.8    Fragment: RESIDUES 29-557 Organism Homo sapiens Gene Names BCHE CHE1 UniProtKB:   Protein Feature View | Search PDB | P06276         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Cricetulus griseus   Polymer: 7 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1EHO  MODEL OF (-)-COCAINE-BOUND BCHE COMPLEX.  1EHQ  MODEL OF (+)-COCAINE-BOUND BCHE COMPLEX  1KCJ  MODEL OF (-)-COCAINE-BOUND (-)-COCAINE HYDROLASE COMPLEX  1P0I  CRYSTAL STRUCTURE OF HUMAN BUTYRYL CHOLINESTERASE  1P0M  CRYSTAL STRUCTURE OF HUMAN BUTYRYL CHOLINESTERASE INCOMPLEX WITH A CHOLINE MOLECULE  1P0P  CRYSTAL STRUCTURE OF SOMAN-AGED HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH THE SUBSTRATE ANALOGBUTYRYLTHIOCHOLINE  1P0Q  CRYSTAL STRUCTURE OF SOMAN-AGED HUMAN BUTYRYL CHOLINESTERASE  1XLU  X-RAY STRUCTURE OF DI-ISOPROPYL-PHOSPHORO-FLUORIDATE ( DFP)INHIBITED BUTYRYLCHOLINESTERASE AFTER AGING  1XLV  ETHYLPHOSPHORYLATED BUTYRYLCHOLINESTERASE (AGED) OBTAINEDBY REACTION WITH ECHOTHIOPHATE  1XLW  DIETHYLPHOSPHORYLATED BUTYRYLCHOLINESTERASE (NONAGED)OBTAINED BY REACTION WITH ECHOTHIOPHATE  2J4C  STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH 10MM HGCL2  2WID  AGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA1  2WIF  AGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA1  2WIG  NONAGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA4  2WIJ  NONAGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA5  2WIK  NONAGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA6  2WIL  AGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA5  2WSL  AGED FORM OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY TABUN ANALOGUE TA4  2XMB  G117H MUTANT OF HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH SULFATE  2XMC  G117H MUTANT OF HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH FLUORIDE ANION  2XMD  G117H MUTANT OF HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH ECHOTHIOPHATE  2XMG  G117H MUTANT OF HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH VX  2XQF  X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY RACEMIC VX  2XQG  X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY RACEMIC VR  2XQI  X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY RACEMIC CVX  2XQJ  X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY PURE ENANTIOMER VX-(R)  2XQK  X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY PURE ENANTIOMER VX-(S)  2Y1K  STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY CBDP (12H SOAK): PHOSPHOSERINE ADDUCT  4AQD  CRYSTAL STRUCTURE OF FULLY GLYCOSYLATED HUMAN BUTYRYLCHOLINESTERASE  4AXB  CRYSTAL STRUCTURE OF SOMAN-AGED HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH 2-PAM  4B0O  CRYSTAL STRUCTURE OF SOMAN-AGED HUMAN BUTYRYLCHOLINESTERASE IN COMPLEX WITH BENZYL PYRIDINIUM-4 -METHYLTRICHLOROACETIMIDATE      Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer CL Search  Download  Cl CHLORIDE ION   Ligand Explorer FUL Search  Download  C6 H12 O5 BETA-L-FUCOSE   Ligand Explorer GLY Search  Download  C2 H5 N O2 GLYCINE   Ligand Explorer K Search  Download  K POTASSIUM ION   Ligand Explorer MF5 Search  Download  C14 H10 F5 N2 O 1-(1-methylpyridin-1-ium-2-yl)-N-[[2,3,4,5,6- pentakis(fluoranyl)phenyl]methoxy]methanimine   Ligand Explorer NA Search  Download  Na SODIUM ION   Ligand Explorer NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type SBG Search  C4 H10 N O5 P SER nonPolymer     External Domain Annotations Hide Pfam Classification: 2 Domains - data from Pfam   GO Terms: 15 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Wandhammer, M.,  de Koning, M.,  van Grol, M.,  Noort, D.,  Goeldner, M.,  Nachon, F. Deposition:   2012-07-04 Release:   2012-08-29 Last Modified (REVDAT):   2013-04-17     Revision History    Hide Mouse over text for details 2013-04-17 Citation 2012-10-17 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.50 R-Value: 0.166 (obs.) R-Free: 0.212 Space Group: I 4 2 2 Unit Cell:   Length [Å] Angles [°] a = 154.23 α = 90.00  b = 154.23 β = 90.00  c = 133.86 γ = 90.00      Molecule of the Month Hide Acetylcholinesterase