Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with noeuromycin DOI:10.2210/pdb4ayr/pdb

4AYR   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 52744.86 Molecule: MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE Polymer: 1 Type: protein Length: 447 Chains: A EC#: 3.2.1.113    Organism Caulobacter sp. K31 Gene Name Caul_4035 UniProtKB:   Protein Feature View | Search PDB | B0SWV2         Source Hide Polymer: 1 Scientific Name: Caulobacter sp.   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 4AYO  STRUCTURE OF THE GH47 PROCESSING ALPHA-1,2-MANNOSIDASE FROM CAULOBACTER STRAIN K31  4AYP  STRUCTURE OF THE GH47 PROCESSING ALPHA-1,2-MANNOSIDASE FROM CAULOBACTER STRAIN K31 IN COMPLEX WITH THIOMANNOBIOSIDE  4AYQ  STRUCTURE OF THE GH47 PROCESSING ALPHA-1,2-MANNOSIDASE FROM CAULOBACTER STRAIN K31 IN COMPLEX WITH MANNOIMIDAZOLE      Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer IFL Search  Download  C6 H11 N O4 (3S,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PIPERIDIN- 2-ONE   Ligand Explorer NA Search  Download  Na SODIUM ION   Ligand Explorer PE4 Search  Download  C16 H34 O8 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]- ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 4 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Thompson, A.J.,  Dabin, J.,  Iglesias-Fernandez, J.,  Iglesias-Fernandez, A.,  Dinev, Z.,  Williams, S.J.,  Siriwardena, A.,  Moreland, C.,  Hu, T.C.,  Smith, D.K.,  Gilbert, H.J.,  Rovira, C.,  Davies, G.J. Deposition:   2012-06-21 Release:   2013-01-30     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.10 R-Value: 0.084 (obs.) R-Free: 0.102 Space Group: H 3 Unit Cell:   Length [Å] Angles [°] a = 143.92 α = 90.00  b = 143.92 β = 90.00  c = 50.19 γ = 120.00