4AUE

Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum

Structural Biology Knowledgebase: 4AUE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.192

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AUE

Classification: OXIDOREDUCTASE

Total Structure Weight: 322324.51

Macromolecule Entities
Molecule Chains Length Organism Details
CATALASE-PHENOL OXIDASE A, B, C, D 717 Scytalidium thermophilum EC#: 1.11.1.6 IUBMB
Gene Name(s):

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HDD
Query on HDD

A, B, C, D CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE
HEME (Synonym)
C34 H32 Fe N4 O5
UMGOPAWIGKFTRK-QQDQPIDJSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A, B, C, D N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.192
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 185.45 α = 90.00
b = 216.34 β = 90.00
c = 68.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-17
  • Released Date: 2013-02-27
  • Deposition author(s): Yuzugullu, Y., Trinh, C.H., Smith, M.A., Pearson, A.R., Phillips, S.E.V., Sutay Kocabas, D., Bakir, U., Ogel, Z.B., McPherson, M.J.

Revision History

  • 2013-04-03
    Type: Citation | Details: JRNL