4AL8

Structure of Dengue virus DIII in complex with Fab 2H12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.66 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.170

Literature

Macromolecules
Sequence Display for 4AL8

Classification: IMMUNE SYSTEM

Total Structure Weight: 58021.60

Macromolecule Entities
Molecule Chains Length Organism Details
ENVELOPE PROTEIN C 101 Dengue virus Fragment: DOMAIN III, RESIDUES 295-395
Mutation: V297M
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FAB 2H12 HEAVY CHAIN H 217 Homo sapiens
FAB 2H12 LIGHT CHAIN L 213 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

H, L GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.66 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.170
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 40.40 α = 93.32
b = 60.60 β = 102.10
c = 62.83 γ = 101.51

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-02
  • Released Date: 2012-06-06
  • Deposition author(s): Midgley, C.M., Flanagan, A., Mongkolsapaya, J., Grimes, J.M., Screaton, G.R.

Revision History

No revisions since initial release