4A3T

yeast regulatory particle proteasome assembly chaperone Hsm3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.186 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Dual Functions of the Hsm3 Protein in Chaperoning and Scaffolding Regulatory Particle Subunits During the Proteasome Assembly.

Barrault, M.B.Richet, N.Godard, C.Murciano, B.Le Tallec, B.Rousseau, E.Legrand, P.Charbonnier, J.B.Le Du, M.H.Guerois, R.Ochsenbein, F.Peyroche, A.

(2012) Proc Natl Acad Sci U S A 109: E1001

  • DOI: https://doi.org/10.1073/pnas.1116538109
  • Primary Citation of Related Structures:  
    4A3T, 4A3V

  • PubMed Abstract: 

    The 26S proteasome, a molecular machine responsible for regulated protein degradation, consists of a proteolytic core particle (20S CP) associated with 19S regulatory particles (19S RPs) subdivided into base and lid subcomplexes. The assembly of 19S RP base subcomplex is mediated by multiple dedicated chaperones. Among these, Hsm3 is important for normal growth and directly targets the carboxyl-terminal (C-terminal) domain of Rpt1 of the Rpt1-Rpt2-Rpn1 assembly intermediate. Here, we report crystal structures of the yeast Hsm3 chaperone free and bound to the C-terminal domain of Rpt1. Unexpectedly, the structure of the complex suggests that within the Hsm3-Rpt1-Rpt2 module, Hsm3 also contacts Rpt2. We show that in both yeast and mammals, Hsm3 actually directly binds the AAA domain of Rpt2. The Hsm3 C-terminal region involved in this interaction is required in vivo for base assembly, although it is dispensable for binding Rpt1. Although Rpt1 and Rpt2 exhibit weak affinity for each other, Hsm3 unexpectedly acts as an essential matchmaker for the Rpt1-Rpt2-Rpn1 assembly by bridging both Rpt1 and Rpt2. In addition, we provide structural and biochemical evidence on how Hsm3/S5b may regulate the 19S RP association to the 20S CP proteasome. Our data point out the diverse functions of assembly chaperones.


  • Organizational Affiliation

    Commissariat à l'Energie Atomique (CEA), Institut de Biologie et Technologies de Saclay (iBiTEC-S), Service de Biologie Intégrative et Génétique Moléculaire, Laboratoire du Métabolisme des Acides Nucléiques et Réponses aux Génotoxiques, F-91191 Gif-sur-Yvette, France.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DNA MISMATCH REPAIR PROTEIN HSM3
A, B
485Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
Find proteins for P38348 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P38348 
Go to UniProtKB:  P38348
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38348
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.186 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 86.07α = 90
b = 94.95β = 90
c = 129.95γ = 90
Software Package:
Software NamePurpose
BUSTERrefinement
SHELXCDphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2012-04-11
    Type: Initial release
  • Version 1.1: 2012-05-02
    Changes: Other