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CRYSTAL STRUCTURE AND IMPROVED ANTISENSE PROPERTIES OF 2'-O-(2-METHOXYETHYL)-RNA
DOI:10.2210/pdb468d/pdb   NDB ID: AR0016
468D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA
    Structure Weight: 9072.94
    Molecule: RNA (5'-R(*(C43)P*(G48)P*(C43)P*(G48)P*(A44)P*(A44)P*(U36)P*(U36)P*(C43)P*(G48)P*(C43)P*(G48))-3')
    Polymer: 1 Type: rna Length: 12
    Chains: A, B
    Details: O2* OF EACH RIBOSE MODIFIED BY METHOXYETHYL
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    C43
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    C43 C12 H20 N3 O9 P C rnaLinking
    G48
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    G48 C13 H20 N5 O9 P G rnaLinking
    A44
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    A44 C13 H20 N5 O8 P A rnaLinking
    U36
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    U36 C12 H19 N2 O10 P U rnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: AR0016
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Teplova, M.,  Minasov, G.,  Tereshko, V.,  Inamati, G.,  Cook, P.D.,  Egli, M.

    Deposition:   1999-04-29
    Release:   1999-05-12
    Last Modified (REVDAT):   2013-02-27
     
  •   Revision History    Hide
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    2013-02-27
    Atom nomenclature
    2013-01-16
    Atom nomenclature
    2011-11-16
    Atom occupancy
    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.207 (obs.)
    R-Free: 0.248
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 41.32 α = 90.00 
    b = 34.55 β = 92.30 
    c = 46.60 γ = 90.00