Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with BocLys and AMPPNP (form 2) DOI:10.2210/pdb3vqy/pdb

3VQY   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ligase Structure Weight: 34145.51 Molecule: Pyrrolysine--tRNA ligase Polymer: 1 Type: protein Length: 291 Chains: A EC#: 6.1.1.26    Mutation: E444G Organism Methanosarcina mazei     Source Hide Polymer: 1 Scientific Name: Methanosarcina mazei   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 2e3c    2zcd    2zce    2zin    2zio    3vqv    3vqw    3vqx        Ligand Chemical Component Hide Identifier Formula Name Interactions ANP Search  Download  C10 H17 N6 O12 P3 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER   Ligand Explorer LBY Search  Download  C11 H22 N2 O4 N~6~-(tert-butoxycarbonyl)-L-lysine   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 3 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Yanagisawa, T.,  Sumida, T.,  Ishii, R.,  Yokoyama, S.,  RIKEN Structural Genomics/Proteomics Initiative Deposition:   2012-04-02 Release:   2013-01-02     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.40 R-Value: 0.197 (obs.) R-Free: 0.231 Space Group: P 64 Unit Cell:   Length [Å] Angles [°] a = 103.36 α = 90.00  b = 103.36 β = 90.00  c = 70.91 γ = 120.00