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Human Pin1 bound to trans peptidomimetic inhibitor
3TDB
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase/inhibitor
    Structure Weight: 18531.72
    Molecule: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
    Polymer: 1 Type: protein Length: 158
    Chains: A
    EC#: 5.2.1.8   
    Fragment: UNP residues 6-163
    Mutation: R14A
    Organism Homo sapiens
    Gene Name PIN1
    UniProtKB:   Protein Feature View | Search PDB | Q13526  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1F8A  Structural basis for the phosphoserine-proline recognition by group IV WW domains 
    1PIN  Pin1 peptidyl-prolyl cis-trans isomerase from Homo sapiens 
    2ITK  Human Pin1 bound to D-PEPTIDE 
    2Q5A  Human Pin1 bound to L-PEPTIDE 
    3TCZ  Human Pin1 bound to cis peptidomimetic inhibitor 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    3TB
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    3TB C24 H38 N7 O7 P
    N-[(1E,2R)-1-[(2R)-2-{[(2S)-1-amino-5-carbamimidamido- 1-oxopentan-2-yl]carbamoyl}cyclopentylidene]- 3-(phosphonooxy)propan-2-yl]-L-phenylalaninamide
    3TB:3TDB
    PE4
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    PE4 C16 H34 O8
    2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]- ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
    PE4:3TDB
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Zhang, M.,  Zhang, Y.

    Deposition:   2011-08-10
    Release:   2012-06-27
    Last Modified (REVDAT):   2012-09-05
     
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    2012-09-05
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.27
    R-Value: 0.221 (obs.)
    R-Free: 0.256
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 69.27 α = 90.00 
    b = 69.27 β = 90.00 
    c = 79.66 γ = 120.00