3T84

Human Carbonic Anhydrase II in complex with Acetylated Carbohydrate Sulfamates

Structural Biology Knowledgebase: 3T84 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 3T84

Classification: LYASE / LYASE INHIBITOR

Total Structure Weight: 29655.95

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 2 A 260 Homo sapiens EC#: 4.2.1.1 IUBMB
Gene Name(s): CA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SG6
Query on SG6

A 4-O-acetyl-6-O-sulfamoyl-alpha-D-galactopyranose
C8 H15 N O9 S
FXBYYANFSLVRSY-YQXRAVKXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
SG6 N/A in BindingDB
Ki: 106 nM  BindingMOAD
Ki: 106 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.159
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.46 α = 90.00
b = 41.43 β = 104.70
c = 72.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-08-01
  • Released Date: 2011-10-19
  • Deposition author(s): Hofmann, A., Wang, C.K.

Revision History

  • 2013-07-10
    Type: Citation | Details: Citation update