3SIL

SIALIDASE FROM SALMONELLA TYPHIMURIUM

Structural Biology Knowledgebase: 3SIL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Observed: 0.116

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3SIL

Classification: GLYCOSIDASE

Total Structure Weight: 42478.59

Macromolecule Entities
Molecule Chains Length Organism Details
SIALIDASE A 379 Salmonella enterica EC#: 3.2.1.18 IUBMB
Mutation: A329D
Gene Name(s): nanH STM0928

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Observed: 0.116
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 47.10 α = 90.00
b = 81.73 β = 90.00
c = 91.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-07
  • Released Date: 1998-11-11
  • Deposition author(s): Garman, E.F., Sheldrick, G.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name