Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella enterica Typhimurium LT2 with Malonate and Boric Acid at the Active Site DOI:10.2210/pdb3s42/pdb

3S42   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Lyase Structure Weight: 61069.52 Molecule: 3-dehydroquinate dehydratase Polymer: 1 Type: protein Length: 276 Chains: A, B EC#: 4.2.1.10    Organism Salmonella enterica subsp. enterica serovar Typhimurium Gene Names aroD STM1358 UniProtKB:   Protein Feature View | Search PDB | P58687         Source Hide Polymer: 1 Scientific Name: Salmonella enterica subsp. enterica serovar typhimurium   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 3L2I  Structure of unliganded enzyme  3LB0  Structure of enzyme with citrate bound at active site  3M7W  Structure of enzyme in covalent complex with substrate  3NNT  Structure of the K170M mutant in non-covalent complex with substrate  3OEX  Structure of enzyme with chloride bound at active site      Ligand Chemical Component Hide Identifier Formula Name Interactions BO3 Search  Download  B H3 O3 BORIC ACID   Ligand Explorer DMS Search  Download  C2 H6 O S DIMETHYL SULFOXIDE   Ligand Explorer IMD Search  Download  C3 H5 N2 IMIDAZOLE   Ligand Explorer MLA Search  Download  C3 H4 O4 MALONIC ACID   Ligand Explorer NI Search  Download  Ni NICKEL (II) ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 5 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Light, S.H.,  Minasov, G.,  Duban, M-E.,  Halavaty, A.S.,  Krishna, S.N.,  Shuvalova, L.,  Kwon, K.,  Anderson, W.F.,  Center for Structural Genomics of Infectious Diseases Deposition:   2011-05-18 Release:   2011-06-01     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.45 R-Value: 0.145 (obs.) R-Free: 0.175 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 36.56 α = 90.00  b = 72.57 β = 90.00  c = 171.35 γ = 90.00