Download MendeleyCrystal structure of enolase PRK14017 from Ralstonia pickettii
Patskovsky, Y., Hillerich, B., Seidel, R.D., Zencheck, W.D., Toro, R., Imker, H.J., Gerlt, J.A., Almo, S.C.To be published.
3RR1
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J
- PDB DOI: https://doi.org/10.2210/pdb3RR1/pdb
- Classification: LYASE
- Organism(s): Ralstonia pickettii 12J
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-04-28 Released: 2011-05-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.174
- R-Value Work: 0.136
- R-Value Observed: 0.137
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative D-galactonate dehydratase | 405 | Ralstonia pickettii 12J | Mutation(s): 0 Gene Names: dgoD, Rpic_2990 EC: 4.2.1.6 |  | |
UniProt | |||||
Find proteins for B2UCA8 (Ralstonia pickettii (strain 12J)) Explore B2UCA8 Go to UniProtKB: B2UCA8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B2UCA8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MLT Query on MLT | E [auth B] | D-MALATE C4 H6 O5 BJEPYKJPYRNKOW-UWTATZPHSA-N |  | ||
| CL Query on CL | C [auth A], D [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.174
- R-Value Work: 0.136
- R-Value Observed: 0.137
- Space Group: I 4
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 118.011 | α = 90 |
| b = 118.011 | β = 90 |
| c = 114.57 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHASER | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2011-05-11 Deposition Author(s): Patskovsky, Y., Hillerich, B., Seidel, R.D., Zencheck, W.D., Toro, R., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
Revision History (Full details and data files)
- Version 1.0: 2011-05-11
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description
