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Crystal structure of cyclophilin A in complex with Voclosporin E-ISA247
3ODI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase/immunosuppressant
    Structure Weight: 192692.50
    Molecule: Cyclophilin A
    Polymer: 1 Type: protein Length: 165
    Chains: A, C, E, G, I, K, M, O, Q, S
    EC#: 5.2.1.8   
    Organism: Homo sapiens
    Gene Names: Gene View for PPIA CYPA
    UniProtKB: Protein Feature View | Search PDB | P62937  
    Molecule: Voclosporin
    Polymer: 2 Type: protein Length: 11
    Chains: B, D, F, H, J, L, N, P, R, T
    Details: A MODIFIED CYCLOSPORIN A
    Organism: Tolypocladium inflatum
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Tolypocladium inflatum)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3ODL  CRYSTAL STRUCTURE OF CYCLOPHILIN A IN COMPLEX WITH THE TRANS ISOMER VOCLOSPORIN Z-ISA247 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    DAL
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    DAL C3 H7 N O2 dPeptideLinking
    MLE
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    MLE C7 H15 N O2 LEU lPeptideLinking
    MVA
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    MVA C6 H13 N O2 VAL lPeptideLinking
    XXA
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    XXA C11 H19 N O3 lPeptideLinking
    ABA
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    ABA C4 H9 N O2 ALA lPeptideLinking
    SAR
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    SAR C3 H7 N O2 GLY glycine
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Kuglstatter, A.,  Stihle, M.,  Benz, J.,  Hennig, M.

    Deposition:   2010-08-11
    Release:   2011-02-16
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.20
    R-Value: 0.166 (obs.)
    R-Free: 0.220
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 69.18 α = 90.00 
    b = 161.34 β = 100.06 
    c = 93.65 γ = 90.00