High resolution structure of naproxen:COX-2 complex. DOI:10.2210/pdb3nt1/pdb

3NT1   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase/oxidoreductase Inhibitor Structure Weight: 139334.36 Molecule: Prostaglandin-endoperoxide synthase 2 Polymer: 1 Type: protein Length: 587 Chains: A, B EC#: 1.14.99.1    Fragment: UNP residues 18-604, catalytic domain Organism Mus musculus Gene Names Ptgs2 Cox-2 Cox2 Pghs-b Tis10 UniProtKB:   Protein Feature View | Search PDB | Q05769         Source Hide Polymer: 1 Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Spodoptera frugiperda   Polymer: 3 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1CQE  COX-1:flurbiprofen  1PXX  COX-2:diclofenac  3NTB    3PGH  COX-2:flurbiprofen      Ligand Chemical Component Hide Identifier Formula Name Interactions BOG Search  Download  C14 H28 O6 B-OCTYLGLUCOSIDE   Ligand Explorer CL Search  Download  Cl CHLORIDE ION   Ligand Explorer HEM Search  Download  C34 H32 Fe N4 O4 PROTOPORPHYRIN IX CONTAINING FE   Ligand Explorer NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer NPS Search  Download  C14 H14 O3 (2S)-2-(6-methoxynaphthalen-2-yl)propanoic acid   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) NPS Search  Download  IC50: 2500 - 1015000 nM (87) - data from BindingDB   Ki: >10000 nM (87) - data from BindingDB   IC50: 900 nM - data from BindingMOAD   N/A in PDBbind     External Domain Annotations Hide Pfam Classification: 2 Domains - data from Pfam   GO Terms: 81 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Duggan, K.C.,  Musee, J.,  Walters, M.J.,  Harp, J.M.,  Kiefer, J.R.,  Oates, J.A.,  Marnett, L.J. Deposition:   2010-07-02 Release:   2010-09-01 Last Modified (REVDAT):   2010-11-17     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.73 R-Value: 0.168 (obs.) R-Free: 0.186 Space Group: I 2 2 2 Unit Cell:   Length [Å] Angles [°] a = 122.29 α = 90.00  b = 133.23 β = 90.00  c = 181.27 γ = 90.00      Molecule of the Month Hide Cyclooxygenase