3M2Y

Carbonic Anhydrase II in complex with novel sulfonamide inhibitor

Structural Biology Knowledgebase: 3M2Y SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.17 Å
  • R-Value Free: 0.161
  • R-Value Work: 0.124

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3M2Y

Classification: LYASE / LYASE INHIBITOR

Total Structure Weight: 30823.75

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 2 A 265 Homo sapiens EC#: 4.2.1.1 IUBMB
Fragment: Carbonic Anhydrase II
Gene Name(s): CA2 Gene View

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BE0
Query on BE0

A piperidine-1-sulfonamide
C5 H12 N2 O2 S
FLKRMXAWABTWSH-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
BE7
Query on BE7

A (4-CARBOXYPHENYL)(CHLORO)MERCURY
P-CHLOROMERCURIBENZOIC ACID (Synonym)
C7 H5 Cl Hg O2
YFZOUMNUDGGHIW-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BE0 Ki: 148 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.17 Å
  • R-Value Free: 0.161
  • R-Value Work: 0.124
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 42.40 α = 90.00
b = 41.40 β = 104.60
c = 72.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-03-08
  • Released Date: 2011-05-25
  • Deposition author(s): Schulze Wischeler, J., Heine, A., Klebe, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4