3LY6

Crystal structure of human transglutaminase 2 complex with adenosine 5' Triphosphate

Structural Biology Knowledgebase: 3LY6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.14 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.233

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3LY6

Classification: Transferase

Total Structure Weight: 237677.52

Macromolecule Entities
Molecule Chains Length Organism Details
Protein-glutamine gamma-glutamyltransferase 2 A, B, C 697 Homo sapiens EC#: 2.3.2.13 IUBMB
Mutation: V224G
Gene Name(s): TGM2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.14 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.233
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 134.18 α = 90.00
b = 215.76 β = 90.00
c = 165.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-02-26
  • Released Date: 2010-08-18
  • Deposition author(s): Han, B.G., Lee, B.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4