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Crystal structure of the I93M mutant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester
3KVF
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/signaling Protein
    Structure Weight: 33922.01
    Molecule: Ubiquitin carboxyl-terminal hydrolase isozyme L1
    Polymer: 1 Type: protein Length: 228
    Chains: A
    EC#: 3.4.19.12    6   
    Mutation: I93M
    Organism: Homo sapiens
    Gene Name: Gene View for UCHL1
    UniProtKB: Protein Feature View | Search PDB | P09936  
    Molecule: Ubiquitin
    Polymer: 2 Type: protein Length: 75
    Chains: B
    Organism: Homo sapiens
    Gene Name: Gene View for UBC
    UniProtKB: Protein Feature View | Search PDB | P0CG48  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2ETL  Mutant of the wild type UCHL1 bound to Ubiquitin Vinylmethylester 
    3KW5   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GVE
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    GVE C5 H11 N O2
    METHYL 4-AMINOBUTANOATE
    GVE:3KVF
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Davies, C.W.,  Maiti, T.K.,  Das, C.

    Deposition:   2009-11-30
    Release:   2010-06-16
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.80
    R-Value: 0.244 (obs.)
    R-Free: 0.284
    Space Group: H 3 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 87.09 α = 90.00 
    b = 87.09 β = 90.00 
    c = 193.48 γ = 120.00