Room temperature neutron structure of D-Xylose Isomerase in complex with two Ni2+ cations and d12-D-glucose in the linear form (refined jointly with X-ray structure 3KBN) DOI:10.2210/pdb3kco/pdb

3KCO   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Isomerase Structure Weight: 43639.96 Molecule: Xylose isomerase Polymer: 1 Type: protein Length: 388 Chains: A EC#: 5.3.1.5    Details: THE PROTEIN WAS PURCHASED FROM HAMPTON RESEARCH Organism Streptomyces rubiginosus Gene Name xylA UniProtKB:   Protein Feature View | Search PDB | P24300         Source Hide Polymer: 1 Scientific Name: Streptomyces rubiginosus   Taxonomy         Related PDB Entries Hide Identifier Details 3KBJ  Room temperature X-ray structure of apo-D-Xylose Isomerase  3KBM  Room Temperature X-ray structure of D-Xylose Isomerase complexed with 2Cd(2+) co-factors and d12-D-alpha-glucose in the cyclic form  3KBN  Room temperature structure of D-Xylose Isomerase in complex with 2Ni(2+) co-factors and d12-D-glucose in the linear form  3KBS  Room Temperature X-ray structure of D-Xylose Isomerase in complex with 2Cd(2+) co-factors  3KBV  Room temperature structure of D-Xylose Isomerase in complex with 2Ni(2+) co-factors  3KBW  Room temperature X-ray mixed-metal structure of D-Xylose Isomerase in complex with Ni(2+) and Mg(2+) co-factors  3KCJ  Room temperature neutron structure of apo-D-Xylose Isomerase (refined jointly with X-ray structure 3KBJ)  3KCL  Room temperature neutron structure of D-Xylose Isomerase in complex with two Cd2+ cations and d12-D-alpha-glucose in the ring form (refined jointly with X-ray structure 3KBM)      Ligand Chemical Component Hide Identifier Formula Name Interactions DOD Search  Download  D2 O DEUTERATED WATER   Ligand Explorer GLO Search  Download  C6 H12 O6 D-GLUCOSE IN LINEAR FORM   Ligand Explorer NI Search  Download  Ni NICKEL (II) ION   Ligand Explorer     External Domain Annotations Hide CATH Classification v3.4.0: 1 Domain - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 8 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kovalevsky, A.Y.,  Langan, P. Deposition:   2009-10-21 Release:   2010-06-16 Last Modified (REVDAT):   2011-07-27     Revision History    Hide Mouse over text for details 2011-07-27 Data collection 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION, NEUTRON DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   1.53 R-Value: 0.199 (work) R-Free: 0.211 Space Group: I 2 2 2 Unit Cell:   Length [Å] Angles [°] a = 94.01 α = 90.00  b = 99.67 β = 90.00  c = 102.86 γ = 90.00      Molecule of the Month Hide Alpha-amylase