3K3P

Crystal Structure of the Apo Form of D-Alanine:D-Alanine Ligase (DDl) from Streptococcus mutans

Structural Biology Knowledgebase: 3K3P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.23 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3K3P

Classification: LIGASE

Total Structure Weight: 84849.33

Macromolecule Entities
Molecule Chains Length Organism Details
D-alanine--D-alanine ligase A, B 383 Streptococcus mutans EC#: 6.3.2.4 IUBMB
Gene Name(s): ddl SMU_599
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.23 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.196
  • Space Group: P 32
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 79.50 α = 90.00
b = 79.50 β = 90.00
c = 109.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-10-03
  • Released Date: 2010-09-15
  • Deposition author(s): Lu, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4