3E5N

Crystal strucutre of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331

Structural Biology Knowledgebase: 3E5N SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 3E5N

Classification: LIGASE

Total Structure Weight: 41946.20

Macromolecule Entities
Molecule Chains Length Organism Details
D-alanine-D-alanine ligase A A 386 Xanthomonas oryzae Mutation: M327V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.196
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 83.04 α = 90.00
b = 83.04 β = 90.00
c = 97.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-14
  • Released Date: 2009-08-18
  • Deposition author(s): Doan, T.N.T., Kim, J.K., Kim, H.S., Ahn, Y.J., Kim, J.G., Lee, B.M., Kang, L.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4