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Crystal structure of the ligand-bound glucagon-like peptide-1 receptor extracellular domain
3C59
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Signaling Protein/signaling Protein
    Structure Weight: 18310.26
    Molecule: Glucagon-like peptide 1 receptor
    Polymer: 1 Type: protein Length: 122
    Chains: A
    Fragment: N-terminal extracellular domain, UNP residues 24-145
    Organism Homo sapiens
    Gene Name GLP1R
    UniProtKB:   Protein Feature View | Search PDB | P43220  
    Molecule: Exendin-4
    Polymer: 2 Type: protein Length: 31
    Chains: B
    Fragment: UNP residues 56-86
    Organism Heloderma suspectum
    UniProtKB:   Protein Feature View | Search PDB | P26349  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
    Polymer: 2
    Scientific Name: Synthetic construct (Heloderma suspectum)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3C5T  The same protein in complex with the native ligand Exendin-4(9-39) 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    10M
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    10M C22 H42 O10 S
    decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta- D-glucopyranoside
    10M:3C59
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Runge, S.

    Deposition:   2008-01-31
    Release:   2008-02-19
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Flag residual B-value
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.30
    R-Value: 0.199 (obs.)
    R-Free: 0.241
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 75.85 α = 90.00 
    b = 75.85 β = 90.00 
    c = 87.55 γ = 120.00