Structure of rice Rubisco in complex with NADP(H) DOI:10.2210/pdb3axk/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Lyase Structure Weight: 137833.84 Molecule: Ribulose bisphosphate carboxylase large chain Polymer: 1 Type: protein Length: 477 Chains: A, B EC#: 4.1.1.39    Organism Oryza sativa Japonica Group Gene Names rbcL Nip064 UniProtKB:   Protein Feature View | Search PDB | P0C512     Molecule: Ribulose bisphosphate carboxylase small chain, chloroplastic Polymer: 2 Type: protein Length: 129 Chains: S, T EC#: 4.1.1.39    Organism Oryza sativa Japonica Group Gene Names RBCS RBCS-C Os12g0274700 LOC_Os12g17600 OsJ_016909 UniProtKB:   Protein Feature View | Search PDB | Q0INY7         Source Hide Polymer: 1 Scientific Name: Oryza sativa japonica group   Taxonomy   Common Name: Japanese rice   Polymer: 2 Scientific Name: Oryza sativa japonica group   Taxonomy   Common Name: Japanese rice       Related PDB Entries Hide Identifier Details 1WDD  Structure of rice Rubisco in complex with CABP  3AXM  Structure of rice Rubisco in complex with 6PG      Ligand Chemical Component Hide Identifier Formula Name Interactions GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer NDP Search  Download  C21 H30 N7 O17 P3 NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type KCX Search  C7 H14 N2 O4 LYS lPeptideLinking NME Search  C H5 N nonPolymer     External Domain Annotations Hide Pfam Classification: 3 Domains - data from Pfam   GO Terms: 13 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Matsumura, H.,  Mizohata, E.,  Ishida, H.,  Kogami, A.,  Ueno, T.,  Makino, A.,  Inoue, T.,  Yokota, A.,  Mae, T.,  Kai, Y. Deposition:   2011-04-11 Release:   2012-04-11 Last Modified (REVDAT):   2013-06-05     Revision History    Hide Mouse over text for details 2013-06-05 Citation 2012-06-13 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.90 R-Value: 0.169 (obs.) R-Free: 0.189 Space Group: I 4 Unit Cell:   Length [Å] Angles [°] a = 110.25 α = 90.00  b = 110.25 β = 90.00  c = 199.77 γ = 90.00      Molecule of the Month Hide Rubisco