3ZM4

Crystal structure of MEK1 in complex with fragment 1

Structural Biology Knowledgebase: 3ZM4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.205

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZM4

Classification: TRANSFERASE

Total Structure Weight: 39181.91

Macromolecule Entities
Molecule Chains Length Organism Details
DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 A 348 Homo sapiens EC#: 2.7.12.2 IUBMB
Fragment: RESIDUES 37-383
Mutation: S298N, S299K, Y300K
Gene Name(s): MAP2K1 Gene View MEK1 PRKMK1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
22T
Query on 22T

A 7-chloranyl-6-[(3S)-pyrrolidin-3-yl]oxy-2H- isoquinolin-1-one
C13 H13 Cl N2 O2
CHDOJNHHXLLFJK-VIFPVBQESA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
22T N/A in BindingDB
IC50: 1100 nM  BindingMOAD
IC50: 1100 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.205
  • Space Group: P 61 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 77.81 α = 90.00
b = 77.81 β = 90.00
c = 222.93 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-05
  • Released Date: 2013-05-22
  • Deposition author(s): Amaning, K., Lowinsky, M., Vallee, F., Steier, V., Marcireau, C., Ugolini, A., Delorme, C., McCort, G., Andouche, C., Vougier, S., Llopart, S., Halland, N., Rak, A.

Revision History

  • 2013-05-29
    Type: Citation | Details: JRNL